../../tmp/servers/virsirnadb/1865820594
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1423 | 1 | atatgtttgcagcgcagatt | 20 | |
| M87664.1 | BLCG2NSM Bunyavirus La Crosse G2/Nsm/G1 gene, open reading frame | 350 | .................... | 369 | 100 |
| M87664.1 | BLCG2NSM Bunyavirus La Crosse G2/Nsm/G1 gene, open reading frame | 4477 | __........._________ | 4469 | 45 |
| U18979.1 | LCU18979 La Crosse virus isolate LAC30928-31 M segment polyprotein gen | 373 | .................... | 392 | 100 |
| U18979.1 | LCU18979 La Crosse virus isolate LAC30928-31 M segment polyprotein gen | 4500 | __........._________ | 4492 | 45 |
| U18980.1 | LCU18980 La Crosse virus isolate LAC22988-89 M segment polyprotein gen | 373 | .................... | 392 | 100 |
| U18980.1 | LCU18980 La Crosse virus isolate LAC22988-89 M segment polyprotein gen | 4500 | __........._________ | 4492 | 45 |
| U70205.1 | LCU70205 La Crosse virus polyprotein gene, complete cds | 373 | .................... | 392 | 100 |
| U70205.1 | LCU70205 La Crosse virus polyprotein gene, complete cds | 4500 | __........._________ | 4492 | 45 |
| U70206.1 | LCU70206 La Crosse virus polyprotein gene, complete cds | 373 | .................... | 392 | 100 |
| U70206.1 | LCU70206 La Crosse virus polyprotein gene, complete cds | 4500 | __........._________ | 4492 | 45 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 373 | .................... | 392 | 100 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 4500 | __........._________ | 4492 | 45 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 373 | .................... | 392 | 100 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 4500 | __........._________ | 4492 | 45 |
| DQ196119.1 | La Crosse virus strain 77 segment middle, complete sequence | 373 | .................... | 392 | 100 |
| DQ196119.1 | La Crosse virus strain 77 segment middle, complete sequence | 4500 | __........._________ | 4492 | 45 |
| EF485031.1 | La Crosse virus strain LACV/human/1960 segment medium, complete seque | 373 | .................... | 392 | 100 |
| EF485031.1 | La Crosse virus strain LACV/human/1960 segment medium, complete seque | 4500 | __........._________ | 4492 | 45 |
| EF485034.1 | La Crosse virus strain LACV/human/1978 segment medium, complete seque | 373 | .................... | 392 | 100 |
| EF485034.1 | La Crosse virus strain LACV/human/1978 segment medium, complete seque | 4500 | __........._________ | 4492 | 45 |
| EF485037.1 | La Crosse virus strain LACV/mosquito/1978 segment medium, complete se | 373 | .................... | 392 | 100 |
| EF485037.1 | La Crosse virus strain LACV/mosquito/1978 segment medium, complete se | 4500 | __........._________ | 4492 | 45 |
| D10370.1 | BLCMRP La Crosse virus M RNA for polyprotein, complete cds | 373 | ............t....... | 392 | 95 |
| D10370.1 | BLCMRP La Crosse virus M RNA for polyprotein, complete cds | 4500 | __........._________ | 4492 | 45 |
| AF123484.1 | Lumbo virus polyprotein mRNA, complete cds | 374 | _..........at..t.... | 392 | 80 |
| AF123484.1 | Lumbo virus polyprotein mRNA, complete cds | 2884 | ___.........________ | 2876 | 45 |
| U12396.1 | LCU12396 La Crosse virus RNA-dependent RNA polymerase mRNA, complete c | 1786 | __.........cg...c... | 1803 | 75 |
| AF525489.1 | La Crosse virus RNA-dependent RNA polymerase (L) mRNA, complete cds | 1725 | __.........cg...c... | 1742 | 75 |
| DQ196118.1 | La Crosse virus strain 77 segment large, complete sequence | 1786 | __.........cg...c... | 1803 | 75 |
| EF485032.1 | La Crosse virus strain LACV/human/1960 segment large, complete sequen | 1786 | __.........cg...c... | 1803 | 75 |
| EF485035.1 | La Crosse virus strain LACV/human/1978 segment large, complete sequen | 1786 | __.........cg...c... | 1803 | 75 |
| EF485038.1 | La Crosse virus strain LACV/mosquito/1978 segment large, complete seq | 1786 | __.........cg...c... | 1803 | 75 |
| EU621834.1 | Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete | 3195 | _.........g.g...____ | 3181 | 65 |
| EU621834.1 | Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete | 68 | ___.........________ | 76 | 45 |
| EU789573.1 | Inkoo virus segment large strain KN3641, complete sequence | 2992 | ____..........._____ | 2982 | 55 |
| AF123491.1 | Trivittatus virus polyprotein mRNA, complete cds | 3208 | __..........ga..____ | 3195 | 60 |
| K02539.1 | SSHM Snowshoe hare virus, complete M RNA segment coding for G protein | 81 | ___.........________ | 89 | 45 |
| K02539.1 | SSHM Snowshoe hare virus, complete M RNA segment coding for G protein | 1600 | _.........__________ | 1592 | 45 |
| K02539.1 | SSHM Snowshoe hare virus, complete M RNA segment coding for G protein | 2887 | ___.........________ | 2879 | 45 |
| U88058.1 | JCU88058 Jamestown Canyon virus M segment polyprotein gene, complete c | 2887 | ___.........________ | 2879 | 45 |
| EU262553.1 | Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple | 62 | ___.........________ | 70 | 45 |
| EU262553.1 | Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple | 1581 | _.........__________ | 1573 | 45 |
| EU262553.1 | Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple | 2868 | ___.........________ | 2860 | 45 |